LOCUS       JO315260                 873 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c51776_c mRNA sequence.
ACCESSION   JO315260
VERSION     JO315260.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          356 a           78 c           88 g          351 t
ORIGIN      
        1 agaatctatt attctatcta attattaaat aattgattat aaaaataatt cattgactat
       61 aactataata aatatttgac tatatatata ctttaaatac attttaataa atatatatta
      121 atagtataga aaacacagac atttacaata caaaatacag atatacataa cttttttatg
      181 aatacaaata cttatgcaat tattgagaca ggaggtcatc aacttcgagt tgaagccggt
      241 cgattctatg acactcgtca tttttctgtt ttgaaacctg atactaaaat tcttatatat
      301 agagttgcta tgattcattt tcaatctcaa ttgatcattg gaaaaccctg gttagctaat
      361 gcaattgtaa aagcacgtat tatacattca tataatagaa aaaaaaatca gagtttataa
      421 aatgcactct aaaaagaaaa cgcgtaaaaa acaaggacat agacaaaaga taacacgatt
      481 tatggtagat gctatttttt tgaatggtag aaatttatca ttataatagc ttattttttt
      541 tatttatatt tatattttaa tatttatatg tttttaaaat tttatatctt tttaatatta
      601 aattaatatg tttttgacat taatggtaat ttgtaaatct tcaaagttaa tattatattc
      661 acatgaaata atatttaaag tttattattc aaatagaata ataatattaa ttcttgtttc
      721 atttatttaa atttttagaa tatttgaaat ttgaatatat tttaatttaa atatgtttta
      781 atatatgttt gttataaaaa aaaaatagtg tatattatca tatatatatg tatatatata
      841 tggataatat atgataacat atagaaatga aat
//