LOCUS       JO313446                 489 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c48013_c mRNA sequence.
ACCESSION   JO313446
VERSION     JO313446.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          128 a          112 c          121 g          128 t
ORIGIN      
        1 tctctatgat caacgatgcg gaaaacatgc tgcgcacttg aattcccggg aacgtatcaa
       61 agtcattggt ttatcataga gacgatttcg ggcaaaagaa attcccatgg tgtgacaccc
      121 gtgcatcttg gattggaaat ccgacgtgta gaatgagtcc tctacatgaa aacttagttc
      181 acactgcagt acagaaagtc tgactttcgt gccatttcag gtgccgtttc ttctacggcg
      241 aatttgcccc ctccatccca tgtggcgacg ttcgtgcccc tttgtcagca tggttgagag
      301 tgatgctgcc aactttcacc gagtttggtc ttgcaaagaa cacggtgcac tggcaaaata
      361 cagcagtatg tgtgactgag caagcacagc cgcaggatat tttgatccga gagcaaccag
      421 ttgccggaat tcccctaaag gcagtggaac ggtcagtgta atggaatgag gcctttataa
      481 gttatgatg
//