LOCUS       JO309810                 627 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c41832_c mRNA sequence.
ACCESSION   JO309810
VERSION     JO309810.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          207 a          100 c          121 g          198 t
ORIGIN      
        1 gatgccgtgg atgacagtac nctgtatcta cttatacgaa gtattaaaga aaaaaagatt
       61 aaaaaaaaga agaagtatag atgttacata aaactatgtt aaaataatct tatctatgtt
      121 ttagagtgaa gttagaaaag gttggaaaat gttttttgaa taaaaaagta aattctggaa
      181 gagttaacaa tcctgaactg ttggcaccaa tttattgata tcaacaccga tgttagtaaa
      241 agctttctcg gcttttctca atttgttttg atggagcttt tttgttcgtg agagaatata
      301 accaaattca acattggcac caatgttagg aaaaaaccgg caggaataca cggcggcgta
      361 ccgtttgtaa tctgtttcaa gaacattata gccaccttct tgaccatttc caaaaaacta
      421 ctcgcaaagc agccggaaca gttgggatcg atgactgttg caagacctag aatggtgatg
      481 tattcacctt gtgcagttat tgcttgattg aatactgtca ctgttccatt gggattgagt
      541 gtgtacgttg cattatcact atttattacc cgcttgaaaa atactgaata ttcgtgcata
      601 ttcgtaccag aagccagtat attcttt
//