LOCUS       JO307606                 410 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c38371_c mRNA sequence.
VERSION     JO307606.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Nitella hyalina"
BASE COUNT          138 a           86 c           61 g          125 t
        1 cgtataacca cgaagagcac caacaataag agcaccataa taacgacatg catcatacgc
       61 ttttgtatct ccatgagtaa gtttgccact ttgacctgaa tattctactg catataatgg
      121 aaatcgatag aaaaataatg gcacaggtgc gagacgcatc agtgctccat taccagccac
      181 ttcatcttca ctacaataaa ctgaaaattc attaagatat tcttcatcat gaatagtatc
      241 tatttgttca agtggaatgt caattttttt gcaaaattct tcttgtcgac gttcaaattc
      301 ttctaaagat tgttttgttg cagcaccaat atcaaagcag tctcctgtcg atgacatata
      361 tccatatcga aaccaccaat ttatatacgt accaattgat cgtaaggaat