LOCUS       JO305691                 426 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c35388_c mRNA sequence.
VERSION     JO305691.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Nitella hyalina"
BASE COUNT          109 a          105 c           89 g          123 t
        1 agcacggcat cttccatcat ttgagaccac gacaagtgaa ccattcagtt gctttttgac
       61 atccccagga accatcacaa tcaggattga tacggcaatt gggttggtta gggagatctt
      121 tacacgaaag tataccttgc tcaaagcagg cttcggcttc ctccttttct tggcgtgttg
      181 gaatgtagtt tctatcgagg aattttatcc acaattgctt ggtcacgaca gatagcatag
      241 cgataaatgc ctccatggtc tccaaaatcg tcaatgcaga attcagtttc gacgatctcg
      301 ccaggacgaa aattggccac aagctttccc cagtcattcg acgggctgtt gtagtcaaga
      361 ccaccaaagc tctttccaca cggtccaatg tattcgttgt ttcctagttc ggattagctt
      421 aactct