LOCUS       JO305000                 431 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c34297_c mRNA sequence.
ACCESSION   JO305000
VERSION     JO305000.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT           91 a          128 c           75 g          137 t
ORIGIN      
        1 tttgtacaaa gatgcgtaat ggataaggct gtctacattg tgtggatgcg atgtcaatta
       61 acttgctcgc tctctcgctt gggcacacac actctttccc gctcttcttc cctccatttc
      121 ctctctattt ccctccctcc attgcctcac accttcttca ctcctttcca aatgttcccg
      181 ccaaaatctc ttccgttttg taatcctctc ttccttatcc ccgcacagac gcacattgtc
      241 ttgatcatcg ccatgtcgga ttcgtctccg ccagctcagc aacaactgca ctgctgagtc
      301 agcgcgagga attatctcgg tagattgaat gggaacctac gctgcattgc gttacataag
      361 catttgttcg cgcccttttg tattttcact caacctaaag aagacgcgat tcatctggtt
      421 gagtgaaaaa t
//