LOCUS       JO304719                 538 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c33846_c mRNA sequence.
ACCESSION   JO304719
VERSION     JO304719.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          117 a          165 c           96 g          151 t
ORIGIN      
        1 tcccctacct ctccttcctt tccttcctcc tctcctcgca cacacctcct ctctctctct
       61 cgctctctct tcatttccaa acacaacaca cgyttttccc tgattacggg tcaatgtatt
      121 agacgattat gctggacgat sscacttctc aaggtatgaa gattctgtca cctggrtaga
      181 ttctrtcagg atcgtcrgta acgtcagtgt ttgcctcgta taagagatcg gctgtaagat
      241 tataacaccc cgcgatggca cagagagtrt cyccttcctg aacctcataa tacctttgct
      301 gtctctgtcc ccttcccaca gccaatgawg tcatcagaac tgccacaagt gctccaatga
      361 tcgagaagaa tcgactgcgc ctattgccct tgctccctgc cttcccctga gcagctaacg
      421 tgtcttggct gtcagaaaga tcaggttttt gaaaatcgaa accctcaggt gatgcagcca
      481 gttctgcagc acgcaatgct ttgccatctt cataaaccag cttctcagga ttcccggg
//