LOCUS       JO304529                 709 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c33540_c mRNA sequence.
ACCESSION   JO304529
VERSION     JO304529.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          160 a          144 c          207 g          198 t
ORIGIN      
        1 tcgttgctgc agccccactc tgtaatctcg cgcacttcca ctcagactct aagttttgga
       61 agacagctta gggttctcca caaccaccat agctcgtttt tcgtgccaat cagcggtcac
      121 tttgaattgg atgacggaca tcgtgcagta ctgttcgaca ggttgcaagg tgtcatggaa
      181 accacggccg gggaggggcc acactttctt gtaccatggc ttcaaaagcc gtacatcttt
      241 gatgtaagga cgcatccaag gtcgatcact gtggtgactg gaacaaaagc gcgaatccca
      301 tgtataagat ggtttggagt ggagggagat tgtaacgtgt tggtgcttga catttttggg
      361 gtcccagctt ggaagaccgt ttcaatttct gcagtcggaa gttcactttg aagacgttat
      421 tgatgttggc ggaccagctg ccaaatttag gcgtggacga gtatgggtac cgacttgcac
      481 ttgaggctat gctgacttgc acttgaatcc gtgctgactt tgagttgctc gcatggtttc
      541 cgatgtttct ttgcagggta gggggtatgg gatagtaggt agaggctttg atggaaggct
      601 gcaggtgttt tcattcgaag ggagtgcaac tggacaggca acagggaggg gtgcattctt
      661 gtaggaatgt ctcttgtatt ttaaatttca agggggtgca aggcacaca
//