LOCUS       JO304469                 438 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c33447_c mRNA sequence.
VERSION     JO304469.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Nitella hyalina"
BASE COUNT          122 a           88 c          101 g          127 t
        1 gtcacaacag accttttcag gtattatcga gagtgtattt ggactaaact gctgtccata
       61 tacattgcaa atcataccag ataaggtctt gagatgcatc agattttgcg gtgctgcatg
      121 catgtggcca ctgctacagt cttcccccag atatcattcc taggtgttat acttgaaaag
      181 cagccgaaat tcaatcatag cagcttggct tctctgaata tactgcctgg gcgttacatt
      241 cgggggaaga ctgtaactat gagtgacatt gagtggctat cgctgacaat gactgactat
      301 aagtgattgt gactgactct gactgactgt gattaactat gatttattat gataggctgt
      361 agctcgctat gactggcgat aactggcaag atgaaaagac aaagagcagt gttgcattca
      421 ccgaacagtg ttcgccat