LOCUS       JO304355                 447 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c33262_c mRNA sequence.
ACCESSION   JO304355
VERSION     JO304355.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          106 a          110 c          130 g          101 t
ORIGIN      
        1 ttgtggacat cgacaggggt gacgatcatg cacatcatca gcatcatcac aagcaccatc
       61 agcggcagca ggaggcccca tctccatcgc ggtgacgttg caacgctgct aatcttcgtc
      121 ttcatttttc ctgcactgtg cgtgtgcgtg tgcgttccgt tgcctgtgtc acctttcgta
      181 gcctgtcgtc acgtgcgtcg tcgttggcgt agggggtgaa tgctgagttt gctgacgtgt
      241 cgattgtcgt tgtcgtcgtt gccattggcg cgagtcgtga cacaacaaca acgagaacta
      301 caacagagcg cgaggtcgag tgcgtaatca gaagacaaga gtacgcgagt acgctagtac
      361 gctagaacgt cgacatcgag aagtagtgaa catgaactga aacgatggaa ggacgcagga
      421 gcggcacgac acaaatgtca caagttg
//