LOCUS       JO303577                 450 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c32017_c mRNA sequence.
ACCESSION   JO303577
VERSION     JO303577.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 450)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          127 a           77 c          101 g          145 t
ORIGIN      
        1 ttgaaggtca gagcgttatt ttgatatttg gtcttgacaa aatagtgttc tatacaaact
       61 gcactgttat tataaaagtt tatctactgt gttctcaaat atggatcaac ttagactacg
      121 tagtgtcttg actttgctcc tgttttcttt aattaacatc attgctgtcc aatccatgga
      181 aggggaatgg ccgatcggtg gatcaggatt gattcaaact gactggactg gtacttggca
      241 tggtatagta gaaacatatc cagaaggaca gcatggcgat ggttggcata agacacttgt
      301 catcggtccc tatcctatgg ctgacgatac ttgcaccaca ttgaacggta catttactga
      361 acatggtgtt gtaaaactaa tgaaggatta tcgtttctgt cgtggacatg atgctacaga
      421 tctgtatatc gatgcaggta gtgatataaa
//