LOCUS       JO302923                 442 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c30888_c mRNA sequence.
ACCESSION   JO302923
VERSION     JO302923.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          125 a           89 c          147 g           81 t
ORIGIN      
        1 gaaggaggag aatgatcggc ttttgatgct gcctgccagt tcaactgcaa gaatggaatc
       61 tgccactgcc aaatgggcgc gtaccacaaa gaacatggtt gagacgggga atttgcggac
      121 gtggacgaga agcgggtgac caagaaacgg acaaacctcc aacaagcttt caggaaggtg
      181 aaggactggc agaagggtga gtctgggaag agatcatgat gggatatgtc aacccaagag
      241 aagaaggact tcggcctcgg gtctgtgtcg attgagcgtc cggcctttga tgccatgatg
      301 gagtggatga atgacagcgg aatgaccgct gatccacaga acggccgaac tcccaggttc
      361 tgcgagaggg gcgtgcaaga ttgccggaag acaatgggga tggatggtga tgaagtggat
      421 gcaaatgtcc acagtccgaa tc
//