LOCUS       JO302683                 479 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c30453_c mRNA sequence.
ACCESSION   JO302683
VERSION     JO302683.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT           81 a          134 c          147 g          117 t
ORIGIN      
        1 gaatgcacca ttcttgtgaa ggtactcctg caagtcgccc tgcgctgcgt agagctgggc
       61 gaaccagccg gtgtttgtcg cgaccagcgg tacgatgttc ggatgatgtt gcgggtgggt
      121 tggtgggaaa cttatgttct taagcacttc gaattcgttg agccagtcct tgccggcctc
      181 ggcggtcatg ggaatcttaa acaccacgac ctttcccttg taggtgccct tccagagcac
      241 ggcctgaccg ccgctgccga tcttcttctc gaacgtgcag tcgtctattt tcggagcttc
      301 cggatcgaca cgcggtgccg cgctcactga gggaagcgaa ggcgatgcag gtagagcact
      361 ggtgctcggc gtaagcgtcg cgctggccgc aaggcgttcc ttcgcctcag ttagttcctt
      421 gcggagggtc tctatctcat ccttgcggag gatgaggtca cggatcgtct cctgcgcaa
//