LOCUS       JO302242                 695 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c29634_c mRNA sequence.
ACCESSION   JO302242
VERSION     JO302242.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          262 a          145 c          113 g          174 t
ORIGIN      
        1 ctaattggga acgaaatcct attgctgaga tgaaagaaga ccgaaggtta atgaacagtt
       61 ttttctatgg tccagtgcaa tcgaacaaag gtgcaacggg aaatgatgat gatgatgatg
      121 atgaaaattt ctcagatgca gaagatacac ctaaacaaat gacatcatct caaataaaac
      181 aaacctctgc cgctgctcct tctccactgc aaactaccaa taaaccaaca actgaatcag
      241 caacaattag taaactcgtt ccacctgtgg ttcaatcagt agcaagttca tctgatcgtt
      301 ctcattctca atcttcaatg aatcgttcaa atgttccacc gacaacaaaa ggttcaacat
      361 ctccaccacc atcgttctca tcatcggcaa aaccaataac aacaactaca gcaacaacaa
      421 atgctccacg taaaacatcg atgagcgacc tggaaaaaga attacaagaa ttcgatatcg
      481 acctcgataa agatgatgta agcgacgttg aaaatggaca aacaacagga gttttttaag
      541 aaaactactg acgaggatga ggatattcaa tttgatgatg atgatgtcga tgaatttctc
      601 aaagatactt gaattatttc gaatatcatc atgtgatata aaatgtatca agttgtctat
      661 canattccat acacatacaa gcacatcaaa taaca
//