LOCUS       JO290857                 673 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c13710_c mRNA sequence.
ACCESSION   JO290857
VERSION     JO290857.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          228 a          113 c          118 g          212 t
ORIGIN      
        1 tggttaccaa ttttaaaaat tcttaaattg gaacaacttt gaaaaagata taccgaatta
       61 tagtgcactg gatatttgtg aagcttgggg cattaaaacg aggatttttt aacagcgaaa
      121 gcatmacgtc cagatgttta tcgagcagct aatcatattc ttcgtttagc actcgatggt
      181 cgtattaatt taattcttcg tccacctggt tttactgttg ataaagaacg atacatatct
      241 gatcctcgtg caactgatct tgaacaacaa attcaatcag ctgttgataa acaaaaacgt
      301 cctgatagta gtatatccgg tggtgatgat agtgaagcat ttccaacaag tgatgatcat
      361 caattagcat cttgtagtgc atcagcaagt gatcaaggtg ctgaattcgt tgaagatggc
      421 aatcgatttg atctattaac acgtgaaaat ggaaacaaat tcgttactaa atccgaaaaa
      481 aattaccatt cgaaaaaatc gacaagattc aaataacaat aatgatcaag ccgatgaaga
      541 agaagtagat tgaatttctt ctccgaaaca gtcatcaaca tttgatatgt atagctcaat
      601 gaacagattc tttctctctc tctctcttct ttttktttaa agaagtgatt gatgtatatc
      661 ccgcttgaaa gtt
//