LOCUS       JO290536                 566 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c13299_c mRNA sequence.
ACCESSION   JO290536
VERSION     JO290536.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          149 a          111 c          153 g          153 t
ORIGIN      
        1 cgggttggat acacgtggaa agcccacggg gttggataca cggaaagccc acgggttgga
       61 tacacgtgga aagccactgg ttggatacac gtggaaagcc cacgggttgg atacacgtgg
      121 aaagcccacg ggttggatac acgtggaaag cgcatgggtt ggatacacgt ggaaagccca
      181 cgggttggat acacgtggaa agcccacggg tgcttgtcga tctgctgagt cttgttcaca
      241 tttaacgatg atgtgacgaa cctcacggtg ccacgttttg ggctctctgc tacagccaca
      301 ttggctaaac gtttgtccgt gtttggtagg agttgatgga tcagacagtg tctaattacg
      361 tacgtgcttt atgtgctcgg tgaacgcacg aataccttag attccgggtc atgtagatca
      421 tatccagtga ttttaaactg actcatatct gtaattaaaa accttacgaa tactttagat
      481 tccgattcat gattagatta tgtagtgatt gcaaactgac tcgaagttgt aattagaaaa
      541 tttgtgtaat ttacatgcag cgattg
//