LOCUS       JO289784                 451 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c12295_c mRNA sequence.
ACCESSION   JO289784
VERSION     JO289784.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          159 a           61 c           75 g          156 t
ORIGIN      
        1 cgattgagaa tagatttgaa attaatactt aatggttcaa ttcgcatcag acaaacatgt
       61 tggttattct catagatcga ccataattgt ccaaaatatt caaattgtct ttcataaata
      121 acatgaatat aggagtaatg attaagttct ctgagaagag tttgtatcaa atcatttgtt
      181 ggttgcgatg atttgcgaag ttaatttgag ttgtattggt aaaatttggg aataattctt
      241 ttccatattc atctctttca tcagaaaaaa ggattattgt ccaagaagtt gaaattggag
      301 ataaacatct ttgatcactt ataattgtaa acaattatga ttgccatcaa taagaaccag
      361 ttgacgacaa tttgatcgcg aagccattga ttgacaaaga tttcaatttt cttgaagaat
      421 gtcttttcag actaatcgaa aagaaacatc c
//