LOCUS       JO270728                 550 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c34339_c mRNA
            sequence.
ACCESSION   JO270728
VERSION     JO270728.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          101 a          174 c          157 g          118 t
ORIGIN      
        1 cagcagggtc aactccgact ttagcggcga aagtcctgaa cgtccccagg atcggcaatc
       61 ctctgcggtg cgcctccgac cgcttcatca gcagaactgc cgccgcgccg ttcggtgatc
      121 tggctcgagt tgccggcggt tgtggatccg tcctttttga acacggcctt cagcttggcc
      181 agactggcgg gggtgacgcc ctcccgcatg ccgtcgtccc gtgagatggt gacgggcttc
      241 tcgtcaccgg tcttcggtcg acgatcttcg tcgccaccgg aataacctcg tccacaaatc
      301 tgccggactt ccaagctgcc accgcgcgag catgagaacg agcggccatc tggtcttggt
      361 ctgctctggt gatgccgtac cgctcagaaa ggccctgggc cactccgatc tcttctactt
      421 agatgataaa gagcttgatt tcagcgagat tattgatgca ccgctcccaa agccgccgga
      481 cttgacacaa cggtcattgc acactggctg gctgtggatg gggtggcagc cagccataca
      541 ggagaaccct
//