LOCUS JO260048 1080 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c13935_c mRNA sequence. ACCESSION JO260048 VERSION JO260048.1 DBLINK BioProject: PRJNA51159 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Klebsormidium flaccidum ORGANISM Klebsormidium flaccidum Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium. REFERENCE 1 (bases 1 to 1080) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 1080) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1080 /organism="Klebsormidium flaccidum" /mol_type="mRNA" /strain="UTEX 321" /culture_collection="UTEX:321" /db_xref="taxon:3175" BASE COUNT 296 a 287 c 319 g 178 t ORIGIN 1 tcccgggatc gtccacccat tcagtcagtc tcttcacagc ttggttccgc gtgagctcgg 61 tcagagcctt ggtgtttccc ctctgaccat tgacatcacc agctaatcca gtggtgtgtt 121 gaaaagggcg aaagggtagg ccgtagaagt cgagtgtcta accgcacctt tccctgtttc 181 ggtgaagagg agtcttcacg aaggagtcga cttctctgga ggagccgcca ggcaacctga 241 cacaacggca aaggctcatc ctgaggccac tgccagcaag ccggctgagc ctgaccctga 301 cgaccaggaa gaagaaggcg gtactgcagg accagacgcg cttgactctg aagcagagat 361 cgccagaaca gcgcaagatg atcagaaagg cgctgcagca cggcggaagt cttcgcggac 421 tgctggcaga agcttcaggt ttgctgagcc cagaacggac gacgagttgg acgacgatgc 481 tgacagcgac agtgacgatg tgccgcttcg accgccctct gcaaagcccg cagtgtcaag 541 accaccgaaa gagaagccag cgagcgctgc tgcaagcaaa gcacccaaga agcggcccgt 601 caccatcaac ctcgacagcg acgacgaagg agagaacgga accccggaga cggaagcgca 661 gacacaagct cctccgagat ccaaacgaaa agccacttcg gctgccaaag cgccagcggg 721 caagaaggca aagaaaggcc gaaaggagga ggatgaggac gcgggcgaag ggagcagcga 781 agacatccct acggaaccaa gcgacgacga cgacagcgat gaggagtgga agttgtgagc 841 gtgcctcgcc gaggaagaat gcagacgcaa cgtgttttca agtatattga cagaagagac 901 cttggcatgc agtgtaattg gatctggcaa ccgcgagaaa ttttgaaaga ctggttagcc 961 ctgccagctt tggcaaagag cgcgttggtg gttccgataa ttgtaaagaa cgatttcaat 1021 tggtcatgtg cggccaacac taacagatcc acagtcaatg ctacacatgc tcttagactt //