LOCUS       JO260048                1080 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c13935_c mRNA
            sequence.
ACCESSION   JO260048
VERSION     JO260048.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          296 a          287 c          319 g          178 t
ORIGIN      
        1 tcccgggatc gtccacccat tcagtcagtc tcttcacagc ttggttccgc gtgagctcgg
       61 tcagagcctt ggtgtttccc ctctgaccat tgacatcacc agctaatcca gtggtgtgtt
      121 gaaaagggcg aaagggtagg ccgtagaagt cgagtgtcta accgcacctt tccctgtttc
      181 ggtgaagagg agtcttcacg aaggagtcga cttctctgga ggagccgcca ggcaacctga
      241 cacaacggca aaggctcatc ctgaggccac tgccagcaag ccggctgagc ctgaccctga
      301 cgaccaggaa gaagaaggcg gtactgcagg accagacgcg cttgactctg aagcagagat
      361 cgccagaaca gcgcaagatg atcagaaagg cgctgcagca cggcggaagt cttcgcggac
      421 tgctggcaga agcttcaggt ttgctgagcc cagaacggac gacgagttgg acgacgatgc
      481 tgacagcgac agtgacgatg tgccgcttcg accgccctct gcaaagcccg cagtgtcaag
      541 accaccgaaa gagaagccag cgagcgctgc tgcaagcaaa gcacccaaga agcggcccgt
      601 caccatcaac ctcgacagcg acgacgaagg agagaacgga accccggaga cggaagcgca
      661 gacacaagct cctccgagat ccaaacgaaa agccacttcg gctgccaaag cgccagcggg
      721 caagaaggca aagaaaggcc gaaaggagga ggatgaggac gcgggcgaag ggagcagcga
      781 agacatccct acggaaccaa gcgacgacga cgacagcgat gaggagtgga agttgtgagc
      841 gtgcctcgcc gaggaagaat gcagacgcaa cgtgttttca agtatattga cagaagagac
      901 cttggcatgc agtgtaattg gatctggcaa ccgcgagaaa ttttgaaaga ctggttagcc
      961 ctgccagctt tggcaaagag cgcgttggtg gttccgataa ttgtaaagaa cgatttcaat
     1021 tggtcatgtg cggccaacac taacagatcc acagtcaatg ctacacatgc tcttagactt
//