LOCUS JO258890 1089 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c11991_c mRNA sequence. ACCESSION JO258890 VERSION JO258890.1 DBLINK BioProject: PRJNA51159 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Klebsormidium flaccidum ORGANISM Klebsormidium flaccidum Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium. REFERENCE 1 (bases 1 to 1089) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 1089) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1089 /organism="Klebsormidium flaccidum" /mol_type="mRNA" /strain="UTEX 321" /culture_collection="UTEX:321" /db_xref="taxon:3175" BASE COUNT 219 a 268 c 333 g 269 t ORIGIN 1 cttttagcag gggccaaaat accatcttcc gaaactgtcc tggtccgatg tgcaatcatt 61 gcgctcttgt caggctacgg gcttcagaaa cagaagcacc ccctgttagg ctcaccaggg 121 gttcgacacc tggtcctagc aagggcgatc attggcttct tcgcactgtc cgcgttcttt 181 tatagtatac aggcccttcc gctgcgcgac gccacggtgc ttaatttcac gatgcccgta 241 atgacggcca tgatggctgc ggtctttctg ggggaggctt gggggagcag ggaggtagcg 301 ggtacgatat gcagcctggt gggagtactg ctggtgacgc agccagacat tctgtttggg 361 aaaccgaaac tcttacaagg tgcgaacgaa cggaagggca gcgaggagac gctgggggtg 421 tttatggcga tcggggggtc tgctttgggg gcagcctcgt acatcgtctt gagagtcgta 481 gggaagaccg gagaaccccc gctagtatgc gtctttgcgt ttgcggcctt ctccgccccg 541 atggcagccg tgggtatgct tttccagccc ttcgcggtac cttctgcttg ggagtggttc 601 gagttggtag tcgtgggcct cagcgctttc gctgcacagg ttctgctgaa ccggggcctg 661 caactagaaa aggcgtccaa agcgacggcg atacagtacg tcaagatcct ggtgacgtac 721 ttgttcggcg tcatcttcct ccacgaggta ccgtcctttt taggtgtcgt cggcgcttgc 781 ctcatcgcgg cgagcgctgc cttcgtaact ctcggcgcag ggcattagct cggggtatct 841 tattgaaaaa cgtgaaaatc cggggattgg tgggaagtag cgacgagaga agttgttact 901 tttggacttc actgcacgca aagtcttgct ttgggaggta cactgctttt gtaagataga 961 ttgagttccg ttggacaagc ttgctggaat agtgagagag ccacagacat caggtaatta 1021 agtcgatgaa tgtgcaagac atacagctcc aaacctgcca gtgggtttca cgtgctccga 1081 gcatgattc //