LOCUS       JO258890                1089 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c11991_c mRNA
            sequence.
ACCESSION   JO258890
VERSION     JO258890.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          219 a          268 c          333 g          269 t
ORIGIN      
        1 cttttagcag gggccaaaat accatcttcc gaaactgtcc tggtccgatg tgcaatcatt
       61 gcgctcttgt caggctacgg gcttcagaaa cagaagcacc ccctgttagg ctcaccaggg
      121 gttcgacacc tggtcctagc aagggcgatc attggcttct tcgcactgtc cgcgttcttt
      181 tatagtatac aggcccttcc gctgcgcgac gccacggtgc ttaatttcac gatgcccgta
      241 atgacggcca tgatggctgc ggtctttctg ggggaggctt gggggagcag ggaggtagcg
      301 ggtacgatat gcagcctggt gggagtactg ctggtgacgc agccagacat tctgtttggg
      361 aaaccgaaac tcttacaagg tgcgaacgaa cggaagggca gcgaggagac gctgggggtg
      421 tttatggcga tcggggggtc tgctttgggg gcagcctcgt acatcgtctt gagagtcgta
      481 gggaagaccg gagaaccccc gctagtatgc gtctttgcgt ttgcggcctt ctccgccccg
      541 atggcagccg tgggtatgct tttccagccc ttcgcggtac cttctgcttg ggagtggttc
      601 gagttggtag tcgtgggcct cagcgctttc gctgcacagg ttctgctgaa ccggggcctg
      661 caactagaaa aggcgtccaa agcgacggcg atacagtacg tcaagatcct ggtgacgtac
      721 ttgttcggcg tcatcttcct ccacgaggta ccgtcctttt taggtgtcgt cggcgcttgc
      781 ctcatcgcgg cgagcgctgc cttcgtaact ctcggcgcag ggcattagct cggggtatct
      841 tattgaaaaa cgtgaaaatc cggggattgg tgggaagtag cgacgagaga agttgttact
      901 tttggacttc actgcacgca aagtcttgct ttgggaggta cactgctttt gtaagataga
      961 ttgagttccg ttggacaagc ttgctggaat agtgagagag ccacagacat caggtaatta
     1021 agtcgatgaa tgtgcaagac atacagctcc aaacctgcca gtgggtttca cgtgctccga
     1081 gcatgattc
//