LOCUS JO258709 823 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c11686_c mRNA sequence. ACCESSION JO258709 VERSION JO258709.1 DBLINK BioProject: PRJNA51159 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Klebsormidium flaccidum ORGANISM Klebsormidium flaccidum Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium. REFERENCE 1 (bases 1 to 823) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 823) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..823 /organism="Klebsormidium flaccidum" /mol_type="mRNA" /strain="UTEX 321" /culture_collection="UTEX:321" /db_xref="taxon:3175" BASE COUNT 163 a 231 c 253 g 176 t ORIGIN 1 cgacgcagga gcgttaactt tcacaagctt tgcgacttgg ccagcaagcg gtcactgcgg 61 caacctatga cgggcttcga aagattgggt ggttccttct tggagtccct ccgtgtctgc 121 gtgcctctgt ggaggaacgc agcaagctga tgccccgttt tgtgccttct ggtcagttct 181 tgcgggttga ggaggtatgg cagcggatgc gggtggccca ggtggtccca gaccttgcca 241 cgtggcagct ccgcatcaag gccttggcgc gcgagcggct catcgcagga cgcgtcagtg 301 cactgctggc gagcatgcag aaggacggag tggccccaga cgaagggacg ctcaggtact 361 ccgcaaagaa cattgacagg tcttggccta aacgtagtca attcagccta gacagcctat 421 gggaagctgt gaagctgcga cttgagcttg ctcttcacgg ctctttgtgc tttcacttct 481 tccaggcacg ttgagtatct ttacgtaatc gcttgtgtca ggatgctgtt tccatgaaag 541 acactgactg gtcgtgtctg ctcgttacag gaccatgttg caagcctgcc gggtctcggg 601 tgacctccct ggtgtccgtt acatgatgag cgtcattcac tcctttgagc gtcaggaggc 661 cagccgtagc agcggcacgg cctcctcgga agaacaacag ccacgcagca ctggggagct 721 gcccacgatc aaagcccggc gtgttgtcac taggcggagc acgctgcgga atccggagcc 781 cccgctacga ccccctgaaa cgagagggac agacgaagga agc //