LOCUS JO258693 1520 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c11665_c mRNA sequence. ACCESSION JO258693 VERSION JO258693.1 DBLINK BioProject: PRJNA51159 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Klebsormidium flaccidum ORGANISM Klebsormidium flaccidum Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium. REFERENCE 1 (bases 1 to 1520) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 1520) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1520 /organism="Klebsormidium flaccidum" /mol_type="mRNA" /strain="UTEX 321" /culture_collection="UTEX:321" /db_xref="taxon:3175" BASE COUNT 349 a 390 c 487 g 287 t ORIGIN 1 gtcgaaggac gcgctgatta tcacagcgac aactagggaa acgattgaga agctgatcaa 61 ggaggcaatg gcgggcgcgc tggcggctgt ggaggagcgc aaagtgacca acgtcaaccg 121 gtggtcgatc gaggagtgct actgggactg cattgggacc cgccccgttc gcccactgca 181 ctcggtcgtt ctggatggag ggatcatcga gactctcgtc aaagacgcac gcactttcat 241 ggccagcgcc aaatggtaca gcgaccgggc gtgccgcacc ggagggggta tttgctgcac 301 ggcccccctg gctgcggcaa gtcgagcagc atcctggccc tggccgggga gcttaacctg 361 gacgttaacc tggtgggttt gtcctccaag gacatgaccg acgagatgct kcmcgrrmkc 421 cttcagcagg tgcgatgcgc ggtccattct ggtcctggag gacatcgacg ccgcgttcgc 481 gcagcgcgac ggcaagagcc ccaacaccct ctccttctcc ggcctcctca actgcatcga 541 cggcgtctgc gcgcaggagg gtcgcattct gatcatgacg accaatcatc tggacaagct 601 ggaccccgct ttgacgcgcc ccgggcggtg cgacgtacac ctgcgcctgg ggctcgcctc 661 ccgggcacaa gttaccacca tgtaccgccg attctacccg gacgccccgg aagatgacgt 721 caacgccttt gccgaccggg ttcccgagag cactgtttcc ccggccaagt tgcagggctt 781 ctttttgctc catcgagacg accgggaggc tgccctggca gacattcccg agctcacgga 841 ggttgcccta ggggggatcc cccggggtcg ggaacggaaa tggagcggaa acggaacaaa 901 aacccccctg cgacgatgtc ccaggggctc cagcggactc tggggcagag aatgcgggaa 961 acggaaacgg tgagagcgat ttagagtcgg acggcgggtc agactccggg agtactaacc 1021 ggtcggaaag tgagagctta gaaaaagatg aggatttttg cgcgcgggta gagacggata 1081 ggatggagaa ggcagagaag gtagatgcgg cagccgtgtt gcttagcgaa gtagatgcag 1141 gtgcgaagac caggcggtcg aaagggaagc gcttggcgaa gatgttctcg tgtatgggga 1201 cctaacgaaa caatttgacg cattcacatt tggcaaggat gagaaaagtc gtgaacatct 1261 cgaaaggagc gcgcgtcagg tgaatggaga catttgcttc agaaggtctg ttgtgatttg 1321 attgttgtaa agagacgcct agctaagaga tggagtcgag acatattgcg tatgtcaacc 1381 cgagcagcat attgagaggg gtcgttactg aagcaggttg ccttcgaccc tttcgatgag 1441 aagatgagcg gattgkttgg gggtagttgc aatgtacatt gagatcaact taaataaatt 1501 tcgaaaaatg tttaccgaac //