LOCUS       JO258693                1520 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c11665_c mRNA
            sequence.
ACCESSION   JO258693
VERSION     JO258693.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          349 a          390 c          487 g          287 t
ORIGIN      
        1 gtcgaaggac gcgctgatta tcacagcgac aactagggaa acgattgaga agctgatcaa
       61 ggaggcaatg gcgggcgcgc tggcggctgt ggaggagcgc aaagtgacca acgtcaaccg
      121 gtggtcgatc gaggagtgct actgggactg cattgggacc cgccccgttc gcccactgca
      181 ctcggtcgtt ctggatggag ggatcatcga gactctcgtc aaagacgcac gcactttcat
      241 ggccagcgcc aaatggtaca gcgaccgggc gtgccgcacc ggagggggta tttgctgcac
      301 ggcccccctg gctgcggcaa gtcgagcagc atcctggccc tggccgggga gcttaacctg
      361 gacgttaacc tggtgggttt gtcctccaag gacatgaccg acgagatgct kcmcgrrmkc
      421 cttcagcagg tgcgatgcgc ggtccattct ggtcctggag gacatcgacg ccgcgttcgc
      481 gcagcgcgac ggcaagagcc ccaacaccct ctccttctcc ggcctcctca actgcatcga
      541 cggcgtctgc gcgcaggagg gtcgcattct gatcatgacg accaatcatc tggacaagct
      601 ggaccccgct ttgacgcgcc ccgggcggtg cgacgtacac ctgcgcctgg ggctcgcctc
      661 ccgggcacaa gttaccacca tgtaccgccg attctacccg gacgccccgg aagatgacgt
      721 caacgccttt gccgaccggg ttcccgagag cactgtttcc ccggccaagt tgcagggctt
      781 ctttttgctc catcgagacg accgggaggc tgccctggca gacattcccg agctcacgga
      841 ggttgcccta ggggggatcc cccggggtcg ggaacggaaa tggagcggaa acggaacaaa
      901 aacccccctg cgacgatgtc ccaggggctc cagcggactc tggggcagag aatgcgggaa
      961 acggaaacgg tgagagcgat ttagagtcgg acggcgggtc agactccggg agtactaacc
     1021 ggtcggaaag tgagagctta gaaaaagatg aggatttttg cgcgcgggta gagacggata
     1081 ggatggagaa ggcagagaag gtagatgcgg cagccgtgtt gcttagcgaa gtagatgcag
     1141 gtgcgaagac caggcggtcg aaagggaagc gcttggcgaa gatgttctcg tgtatgggga
     1201 cctaacgaaa caatttgacg cattcacatt tggcaaggat gagaaaagtc gtgaacatct
     1261 cgaaaggagc gcgcgtcagg tgaatggaga catttgcttc agaaggtctg ttgtgatttg
     1321 attgttgtaa agagacgcct agctaagaga tggagtcgag acatattgcg tatgtcaacc
     1381 cgagcagcat attgagaggg gtcgttactg aagcaggttg ccttcgaccc tttcgatgag
     1441 aagatgagcg gattgkttgg gggtagttgc aatgtacatt gagatcaact taaataaatt
     1501 tcgaaaaatg tttaccgaac
//