LOCUS JO258017 571 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c10567_c mRNA sequence. ACCESSION JO258017 VERSION JO258017.1 DBLINK BioProject: PRJNA51159 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Klebsormidium flaccidum ORGANISM Klebsormidium flaccidum Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium. REFERENCE 1 (bases 1 to 571) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 571) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..571 /organism="Klebsormidium flaccidum" /mol_type="mRNA" /strain="UTEX 321" /culture_collection="UTEX:321" /db_xref="taxon:3175" BASE COUNT 132 a 146 c 170 g 115 t ORIGIN 1 agcagtagcg gtagcgctgg ggaactggcc gggcaacgga gggaagacga tcgtcgattt 61 ssggwwytmc mrggatcggc gagatcgccg ttcttgtccg ggacgagtct ccggacgctc 121 ggtcgtggct gctgctgctg cccacgggcg acctcccctt tgctccggtc gggaatacgc 181 tcgtggacaa ggaaccgatg gcgctgctcg cgctctgttt ggagacggag gctattcaca 241 ccgtcgactg gggtgaaggc aagctgagag agctgtcgct gcatgccgcc atcacgcccc 301 tagccgtcag cggaaagcgt ggcgtcgctt gcgtatctgc tggacatcgg cgcattctac 361 tgtacgactt ggaggattcc gagagcaacg aagacgagat ctgaaaccta tgtggcaagt 421 gctagatagt aaacagccgg acaattgccg agccacaaat gtcttcactg gaatcgcagt 481 actagatgac tcgagcattg aaacatgcaa gaatctgcgc catgaccatt ttatatatct 541 gagcatgact tggatctacc aaaaaaaaaa a //