LOCUS       JO258017                 571 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c10567_c mRNA
            sequence.
ACCESSION   JO258017
VERSION     JO258017.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          132 a          146 c          170 g          115 t
ORIGIN      
        1 agcagtagcg gtagcgctgg ggaactggcc gggcaacgga gggaagacga tcgtcgattt
       61 ssggwwytmc mrggatcggc gagatcgccg ttcttgtccg ggacgagtct ccggacgctc
      121 ggtcgtggct gctgctgctg cccacgggcg acctcccctt tgctccggtc gggaatacgc
      181 tcgtggacaa ggaaccgatg gcgctgctcg cgctctgttt ggagacggag gctattcaca
      241 ccgtcgactg gggtgaaggc aagctgagag agctgtcgct gcatgccgcc atcacgcccc
      301 tagccgtcag cggaaagcgt ggcgtcgctt gcgtatctgc tggacatcgg cgcattctac
      361 tgtacgactt ggaggattcc gagagcaacg aagacgagat ctgaaaccta tgtggcaagt
      421 gctagatagt aaacagccgg acaattgccg agccacaaat gtcttcactg gaatcgcagt
      481 actagatgac tcgagcattg aaacatgcaa gaatctgcgc catgaccatt ttatatatct
      541 gagcatgact tggatctacc aaaaaaaaaa a
//