LOCUS JO257808 1374 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c10228_c mRNA sequence. ACCESSION JO257808 VERSION JO257808.1 DBLINK BioProject: PRJNA51159 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Klebsormidium flaccidum ORGANISM Klebsormidium flaccidum Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium. REFERENCE 1 (bases 1 to 1374) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 1374) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1374 /organism="Klebsormidium flaccidum" /mol_type="mRNA" /strain="UTEX 321" /culture_collection="UTEX:321" /db_xref="taxon:3175" BASE COUNT 363 a 324 c 326 g 357 t ORIGIN 1 ctggtccggt gctcgttcgt ctttaacgaa aagtacaata tccagataca gagaccttcg 61 attgagtatt cttatatttg gcatgttacg gacacctgtc aggggtcttc aagggttact 121 ttatctgaac ttcagtgggt tggtaaagaa gttcgggcaa cggctgcagc ttatattgtc 181 aatccatacg cctttgatga aagctgagca tgcttgtagc ggttttgccc cagccttctt 241 gtttaccgtc agtgccagta gtttgacacc tgacccccgg caagccttta aaggttatac 301 aggccagaga gaagctcgat tgccggcttc tgagcaatca tgatctggct caaaagcaaa 361 gagttgcgat attttgcaag cttgtactcc caattgatgc aggaggacaa aggcacgagt 421 acgggtaact ccttgggtac agaggcttag cactttcgag gtaagcatcg acaatcttga 481 rctmsgatgg tcacgttttg gagaaaagag gccacttacc ttacatccac tggtgtctac 541 tcaaggggtt tcttgctgag ttacaataaa gttgctgctc tttctgccta tttcaaaccc 601 cagtgcagat tgatgcaagt ctgcatttga gacaacagat tgtcgcataa gcaaaaaacc 661 tgccagcata tttagcaact tacagctcca gcaattagct gcgtcttctt cagacggcaa 721 ggtgcatcct tctataaaag tggccaggtc agcaactcaa gtcacaatgg tggtgtggac 781 agcagtagtg caatgttgaa gtgttggaat taccagtcat gcaccataca agtcgcgaag 841 ccttgcaagt ggcagcttac ctgagtccac aagtacactc tggaatatgc ttgtgcagct 901 gctcacaatg cgcatacttc ttcaaaccag gctgagaaga gaggccagca actccgatca 961 gaatgcacaa cgactacctt ctcaggaaaa gccagccctt caccaccttt tgctgctcac 1021 aaagcggcgc caacaattca aacaggtgca tagtgatgat tccagctggg aagctgccgg 1081 tttacaatga gacttttaga tgtgctgctt tgcaatacag acttgagtct ggagttccgc 1141 ttgtagactt tggcgggaaa agcacctact tggcaggcat cggcttccat caggaagaca 1201 cttggcatcc acttgtctta gttctgagcg ggcaaacttg aaaggtttaa aatgtgtcac 1261 gaccatcaca ggcgatatat gtcgagctat tttwgttgga gcgtataccg taaacaggaa 1321 gacaccacgg acaggagaat cgtgcaagtc tcccgtccta tttctgtcca tccc //