LOCUS       JO257808                1374 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Klebsormidium flaccidum strain UTEX 321 kfla_c10228_c mRNA
            sequence.
ACCESSION   JO257808
VERSION     JO257808.1
DBLINK      BioProject: PRJNA51159
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Klebsormidium flaccidum
  ORGANISM  Klebsormidium flaccidum
            Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
            Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Klebsormidium flaccidum"
                     /mol_type="mRNA"
                     /strain="UTEX 321"
                     /culture_collection="UTEX:321"
                     /db_xref="taxon:3175"
BASE COUNT          363 a          324 c          326 g          357 t
ORIGIN      
        1 ctggtccggt gctcgttcgt ctttaacgaa aagtacaata tccagataca gagaccttcg
       61 attgagtatt cttatatttg gcatgttacg gacacctgtc aggggtcttc aagggttact
      121 ttatctgaac ttcagtgggt tggtaaagaa gttcgggcaa cggctgcagc ttatattgtc
      181 aatccatacg cctttgatga aagctgagca tgcttgtagc ggttttgccc cagccttctt
      241 gtttaccgtc agtgccagta gtttgacacc tgacccccgg caagccttta aaggttatac
      301 aggccagaga gaagctcgat tgccggcttc tgagcaatca tgatctggct caaaagcaaa
      361 gagttgcgat attttgcaag cttgtactcc caattgatgc aggaggacaa aggcacgagt
      421 acgggtaact ccttgggtac agaggcttag cactttcgag gtaagcatcg acaatcttga
      481 rctmsgatgg tcacgttttg gagaaaagag gccacttacc ttacatccac tggtgtctac
      541 tcaaggggtt tcttgctgag ttacaataaa gttgctgctc tttctgccta tttcaaaccc
      601 cagtgcagat tgatgcaagt ctgcatttga gacaacagat tgtcgcataa gcaaaaaacc
      661 tgccagcata tttagcaact tacagctcca gcaattagct gcgtcttctt cagacggcaa
      721 ggtgcatcct tctataaaag tggccaggtc agcaactcaa gtcacaatgg tggtgtggac
      781 agcagtagtg caatgttgaa gtgttggaat taccagtcat gcaccataca agtcgcgaag
      841 ccttgcaagt ggcagcttac ctgagtccac aagtacactc tggaatatgc ttgtgcagct
      901 gctcacaatg cgcatacttc ttcaaaccag gctgagaaga gaggccagca actccgatca
      961 gaatgcacaa cgactacctt ctcaggaaaa gccagccctt caccaccttt tgctgctcac
     1021 aaagcggcgc caacaattca aacaggtgca tagtgatgat tccagctggg aagctgccgg
     1081 tttacaatga gacttttaga tgtgctgctt tgcaatacag acttgagtct ggagttccgc
     1141 ttgtagactt tggcgggaaa agcacctact tggcaggcat cggcttccat caggaagaca
     1201 cttggcatcc acttgtctta gttctgagcg ggcaaacttg aaaggtttaa aatgtgtcac
     1261 gaccatcaca ggcgatatat gtcgagctat tttwgttgga gcgtataccg taaacaggaa
     1321 gacaccacgg acaggagaat cgtgcaagtc tcccgtccta tttctgtcca tccc
//