LOCUS       JO240128                1208 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c13935_c_s mRNA
            sequence.
ACCESSION   JO240128
VERSION     JO240128.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          282 a          300 c          366 g          258 t
ORIGIN      
        1 tgcagttgaa aagtactctc acgataacat ctcctgtagc accttctctc gcagcactaa
       61 ggagtaaact ggcsgcagga ggtccgacac tcatggattt tgcgagctcc ggaaagtcac
      121 cttggctatg ctgtggaagc ggtgcaacca aaagagaaga agctgaagcc agattggatg
      181 aaacgcatca ttcctggcgg tgagaaatac acacagatta agagtaagct acgggggttg
      241 ggactgcaca cagtttgtga ggaggcaaag tgtccaaaca tcggggagtg ctggagtggg
      301 ggggagactg gaactgccac ggcaaccatc atgattctgg gggacacatg cactcgcgga
      361 tgccgattct gtgccgtgaa gacgtcaagg gcgccgccgc ctcctgacgc ggacgagccg
      421 aggaaggttg cagatgcagt ggccgcatgg ggactggact acgtggttct tacgagtgtt
      481 gatagggatg acctccctga tcagggtagc aaccactttg cagaaacggt gcgggggctc
      541 aaaagagcgg aagcctggca tgcttgtcga ggctcttgtt ccggattttc ggggaggatc
      601 cagaatgcgt cacacgcgtt gcgacgtccg gtctggacgt ctttgcgcac aacgttgaga
      661 cagtggagga gctgcaggca gtggtccgtg accggcgtgc caattttgcg cagtcgttgg
      721 gggtgctgcg tctagccaag gagatcgcgc cacctggcac gctcacaaag acctccatca
      781 tgctcggctg cggcgagacc ccggaccagg tgcttcgtac gatggagaaa gtgcgcgccg
      841 ctgatgtgga tgtcgtcaca tttggacaat acatgcgtcc gacaaagaga cacatgcctg
      901 tctctgaata cgtcaccccc gagggctttg accactggcg cattgttggg gagcagatgg
      961 gcttccgcta cgttgcctcg gggcccatgg tgcggtcctc atacaaggcg ggagagttct
     1021 acatcaagtc catgattgag cgtgatcgcc aagcaaacga aactaacagc cgcaaaagac
     1081 ctcagtatga atgagaaccg caataagtgt ctcttgtgta ttccgtgttg ccgatttaag
     1141 ttgaagcatg aatgctagcc ttctatggct cccatgggtg attttaaaat wctcactctc
     1201 tctctctc
//