LOCUS       JO239556                 540 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c13050_c_s mRNA
            sequence.
ACCESSION   JO239556
VERSION     JO239556.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          120 a          110 c          188 g          122 t
ORIGIN      
        1 tgtgatggca gagtcgggat ttagagtgca ctctgagtgt agaggattta tgccactcag
       61 ggagggggag acgcagggga ggattgtgaa cttggtggga gttatttctg gggagggaac
      121 gagagttctg ggggatgtgg tggtggcaga tccggagcgt cagacttgcc acagagcagc
      181 agtaacagag ggacacgcag cagcaatggc cgaggccgtc aagatgacga aatacggcga
      241 ccacttccct gccgacagct tctactcgct agctctcgag acatacggtt gattcgggag
      301 atccttgagc gcattgttgt ctaggtgctc agagcgggct ttctatgctt cggtagggac
      361 atctgtagta gatggagtgg gctcacagtc agtgggcact tgggcatcag gagcattgag
      421 atggttgtcc tactttagag ggcgggttag cattgccttg cagagatcgc aggctgtagc
      481 tcttcatgat agagctgcta ggatcactga gggagacagg caggccagct cgcactctag
//