LOCUS JO238993 300 bp mRNA linear TSA 23-FEB-2012 DEFINITION TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c12171_c_s mRNA sequence. ACCESSION JO238993 VERSION JO238993.1 DBLINK BioProject: PRJNA51149 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Coleochaete sp. CFD ORGANISM Coleochaete sp. CFD Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Coleochaetaceae; Coleochaete. REFERENCE 1 (bases 1 to 300) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 300) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..300 /organism="Coleochaete sp. CFD" /mol_type="mRNA" /strain="CFD" /db_xref="taxon:1068959" BASE COUNT 95 a 78 c 55 g 72 t ORIGIN 1 gaatagagag ccattcatta gcaatcgtgt ttgtggccca acatctaaaa gaacacccaa 61 gtagaagcga caaccatgac catggctctc gtgcttaagc ccccaataat gacatccaca 121 acacgcggac gtaaacatct taggccttca ccctataggt tatccgattt ctttcattgt 181 actatgagca tttttaagca gaatcaacca cgaatgagta gctcctttat tatggcaact 241 acatgccctg taatacgccc cccgcggctt ttgagaggac tagggaacaa aaatacaaca //