LOCUS       JO238899                 708 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c12023_c_s mRNA
            sequence.
ACCESSION   JO238899
VERSION     JO238899.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          163 a          140 c          192 g          207 t
ORIGIN      
        1 aacatgcaat gccatttgga acaagggata tgggactgca ttgcctcaga acatttgtgc
       61 tcttgttctt ctccaggagg tgagaacccg aaccttgcgg accttgccgt ttatggcgtt
      121 ctccaatcca tcmksaatky mcgggttccc gggatcacga gctgttggag aagagcaaga
      181 tcaggccatg gtatgagcgc atgaaggtgg ctgtggggga gccttgcagg atcgcagatg
      241 catgatcgta catgacttag tctcccagag catatccgtt aaactctttt ttcaacctcg
      301 cttctgccaa tctgcactca aaaaagtgtt cttgacagag aggtatgcaa tagaggcaat
      361 gctctcttac gcatgttaat aacgccagtg gatacttttt gaagttttta gccacggcgc
      421 aagttttgtg caatgtcagt cttgctagct tctagggaat tttattagtt tcattttttg
      481 gggagggggg aattgagaat aagtggcgag gtgtctgttt ggactccaag tcgttggaca
      541 ggacgcattt aggagtggtc cagtggtgca ggagggtcat ggagtacatg tgctttgatg
      601 tttgttgcac atagcagagc tgggaggagg gaacacgcag gttgttgttt tgtcagaaca
      661 taatacactc ttcttagttt atttcagtgc gaggtctctc tctctctc
//