LOCUS       JO238682                 574 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c11665_c_s mRNA
            sequence.
ACCESSION   JO238682
VERSION     JO238682.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          103 a          179 c           94 g          198 t
ORIGIN      
        1 ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct
       61 ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct ctcgcgcgcg
      121 cgcgcgcgcg cgctctctct ctccatcgag gccatcaaag tgttttgagg atgctgcctt
      181 gtgccatagt acatctctgt ctctctcgca ttcgttcatt gacgcaggga atgcatgcat
      241 gcatgcagtt ttatgatttc ttccacttcc cgcaatcttg agtccttcca tgttcaggtt
      301 ttccttccgg gtgtaattga ctagcatgca tgtatgaagg aactatgtat ctctaccatg
      361 catgtgttgg agaaaaagaa agatttgtcc ttgagcatac cctcttgaga tattcattta
      421 cacatgtttt gcacattaat gctctcatcg caatttcata tatcacgatg tagtacccgt
      481 atagtcaaca tccattggac acgcacaact cgcactcctc acacatgtgt gtgtgtgtaa
      541 gggatgctac catgagcaca ccctcctccc ttgc
//