LOCUS       JO238536                 865 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c11408_c_s mRNA
            sequence.
ACCESSION   JO238536
VERSION     JO238536.1
DBLINK      BioProject: PRJNA51149
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Coleochaete sp. CFD
  ORGANISM  Coleochaete sp. CFD
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Coleochaetaceae; Coleochaete.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Coleochaete sp. CFD"
                     /mol_type="mRNA"
                     /strain="CFD"
                     /db_xref="taxon:1068959"
BASE COUNT          232 a          248 c          175 g          210 t
ORIGIN      
        1 gcatagtcct cttgacactt agagattgct gcccggtttt ccatccagac ttattactta
       61 gcacacctgc tttccactat aaactcagtg actatgacta cacggatatg acagacgctt
      121 ctcaagcaag tagtctcacc acacggtcat cataacatgc cactcgtagc atcatcaaag
      181 tcaacagagt tttagtgcga caactgtgta ttctagggtt ccaaaccccc gtcaacacat
      241 tgtgaggcct tggttttcag agaacggtct ttctggttcg acatttccat gcagcaatgg
      301 gggacatggt atcaaaaccc taattctgaa aaccctaatt tcgtaaaaaa cacttttcga
      361 tgccgaatcg ggacgaagaa agaactatgc acgatttgca ccgtacttcc accgtagggc
      421 cgagaaagca aattgcagga ttagacaaag gattagggtt tttgaaagta gctacgccgg
      481 actgacgtct tctcctatac aagacccact tattatccct tgcgatcggt tgttgaactc
      541 caaaaactcg ggaaaaccca tccaacaccg acaaaaaaat accaagcaca aaagtcgggc
      601 gtagtctttc ggggagcttc gagcctgcgc cacgtcagca gtcctcaaac ttccgccttg
      661 cataacacag ccttggggtc gtccccgtca aacagtaaat tgctttgcct tttattgtac
      721 actccacact agccgcggcg ccgttccaac gtcccctctg cactactgta cacttctttg
      781 cccaccgccg ccccgcagcc actcgagaac aggcctcagt gtggattccc tgggcaagta
      841 gcccatagac ctcacgctcg tctga
//