LOCUS       JO232424                 491 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c58170_c mRNA sequence.
ACCESSION   JO232424
VERSION     JO232424.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          119 a          122 c          150 g           94 t
ORIGIN      
        1 gtgggtgtag cagcwkcmcg cgsaggcaaa gatggtgaag ttttcttgaa gccgaacaag
       61 gtggtgctgc tgcttcaggg ccggtatgcc ggccggaagg cagtgatcgt gaagaatttc
      121 gacgacggcg tgtccggcag gcaatatggc catgcgctcg tggccggcat cgccaagtac
      181 ccccgcaagg tgtcgaagaa gctgccgcct aagactctgg caaagcggtg caggctcaag
      241 tcgttcataa agctcgtcaa ctacaaccac attatgccca ctcggtacca gctggatgtc
      301 gacctgaaga acactgtgac tgtggacaag cttgagacca gcaccaagcg caaggagacc
      361 cgcaaggaag tgaagaagat tttggaggga garggttcsa agacgtggac aaagaacgag
      421 gtggttcttc tccaagttgc ggttctagat gctgcctggc atcaaggctc ctgactcgct
      481 ggctacacct t
//