LOCUS       JO232225                 654 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c54917_c mRNA sequence.
ACCESSION   JO232225
VERSION     JO232225.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          161 a          187 c          201 g          105 t
ORIGIN      
        1 taagtacctc acgggtccat tgttgccgca acgtgtcgtg cctcattgtg tcgcacgact
       61 cgtccttcct cgacaacgtg tgcactgaca tcatccacta cgacaagcgc aagctcagac
      121 agtaccgcgg caacctcgct gccttcgtca aagtgaagcc ggaagcaagg gtctactacg
      181 atctggaggc cgcggcgttt gcgttcaaat tcccgcagcc gggcatgctg gacggcatca
      241 agcgcaagga gacgcccatc ctgaagatga ccaacgtcac gttccagtac tcgggcgcgg
      301 agaagcccac gctggtggac gtgaatgtgc agtgctcgct gggaagcagg gtgggtgtgg
      361 tcggtgccaa tggcgcgggc aagtcaacgc tcatcaagat gctgacggga gaaacgaggg
      421 cctcgacggg tacaatatgg cggcacccca acctgggcat ggcgtacgtg gcacagcatg
      481 ccttccacca cgtcgaacaa cacctggaga agagccccag cgagtacatc cgctggcgtt
      541 tcgcacgcgg tgaagacaga gaagagctca acaaggtgca ccgcaagatc agcaaggagg
      601 aggcaaaagg cgatggagga ccctgatcat gcacaacggc cagagaaagc aggt
//