LOCUS       JO231690                 713 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c48590_c mRNA sequence.
ACCESSION   JO231690
VERSION     JO231690.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          204 a          169 c          191 g          148 t
ORIGIN      
        1 cagcagcagc agccggagca gaagcagcag tagcaggagc agcggccaca gcaacagtac
       61 ggaaggagtg gttgcaaggc tcaagttcta tgtttgcagg accattgccg aacaagcaca
      121 tggtcaagca gctcaagcca gcaagccagc gaaraagtac aagcaggcaa gccgactgaa
      181 cattgaagca gccttgactc tgtctgggat gcagcaaacg ggcaacaaaa taaggcaaaa
      241 gcaaggagca caactttcct ggacgtggtg ttgcgccagc caggctatga gtacgtcacc
      301 attcgttgac tgagtcgtcg tagtgcaaac gatcacacct tgtgctcaaa agggcacagc
      361 tcactgccaa caatgaaagc ttcgttcaaa atggtgtcgt gtgaagtaaa ggtggagaac
      421 ggcctctcct ccgtgactct ggtccggagt agttcaaggt tatgcctctc gacaaggatg
      481 ggtgctcgct agatttgatc aggcattcaa cggacaatct gaagatgact gtgtcacaag
      541 catttgggtg acatgcgaga tagtgtggta gtagtcgaac aaggcgatgc aaagtgcgaa
      601 tggtgtacat cttgtacaca agaagctagc gcaaggagag agcaatggcc ttttgcctca
      661 ccctctaatg ctatgatatc accttacatt gcctaatcca atttccttcc ttc
//