LOCUS       JO228576                 812 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c32720_c mRNA sequence.
ACCESSION   JO228576
VERSION     JO228576.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          186 a          196 c          218 g          211 t
ORIGIN      
        1 cgtcaccggc cgacccgcaa aggcgacaac agccccacgc tgctcagtag aggccattga
       61 ttggtaccat tgcgggcgga cattgttgcc gatccatttg agtgcaggtt caccggtgca
      121 agtgcactgg tgcaagtgca gtggtgcaac aggagattct ggttgtgtgt ggcagtccat
      181 gcccacccaa tcaacatggt gcgagcgcag gtgctctgcc acacaacgct ccttaccgga
      241 ccagtcgaat ctctgccccc cttttgcgtt cagcaacgac gctcgaaatc gattcctttg
      301 gcactttggt atttatgggc acagcggcat cagcaaarca tggtctgcga gtgacgattg
      361 ctgagcaccg gcagtgctgt gtggacacct gtgaactagg tggaagcgcc cactgctttt
      421 tctcacacgg actgcgaggt tctcagagga cttagatttt ctgaaggttt cgtgtgttcc
      481 tttcagaggg gaattatttg gctcaaatgg ttggtactcc ctttcaaacc aatggtggtc
      541 tttctgttga ggtcatcctg aacgttagac aacagctgac agtagcctta gagacggcct
      601 tttcggcagt aatttggaca gaggcattca tatgtctcag aaagacatgg aggctacgga
      661 gtgtaccaag gacaaggaca gattttgaat tcaaaattgc tgaacctaac gatgtagtag
      721 ggatctggct tttgcccatg cccatggatg tgatccataa ctattccctg agtattgtaa
      781 tgagttctca acaagaggtg cgtttgcctt tg
//