LOCUS       JO228302                 391 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c32017_c mRNA sequence.
ACCESSION   JO228302
VERSION     JO228302.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          101 a          138 c           68 g           84 t
ORIGIN      
        1 gtcatcgtca ctcgtcactc gtcactcgtc actcgtcact cgtcactcgt catcgtcatc
       61 gtcatcgtca tcgtcatcgt catcgtcatc atcaccacca ccaccgtcat caccagcaca
      121 atcaccacca ctaccactac caccagcact agcatcagca ccagctgtag caaaaccacc
      181 accacttcca ccatcatcta cattgttgac gtcaacaatg tcggcactac aactgtcaac
      241 atcatctgtg gtggttaagt catgtgcaaa gttccccact cggcggcctg aagttgtgag
      301 gtggcagagg tgcatcctca gcgcagacat ggaagagaca gcgtcctccc tttccctggc
      361 acaaccaaaa cagatgcaaa catctccagc c
//