LOCUS       JO228290                 758 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c31990_c mRNA sequence.
ACCESSION   JO228290
VERSION     JO228290.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          185 a          210 c          188 g          175 t
ORIGIN      
        1 atcacttcta cattgacata ggaaaggaac atgaaatgct ttgcgtttga atgaggagac
       61 agactcgaca acccatctac gacaagtccg tctgcacttt caagttttgt ttacaaaaat
      121 ttgctttttc atctgactcg ttggagcata gtctcatcct cttccaccat gatttggaaa
      181 tcctgctcct cctccatcgc agccaccaga ttttggatcg ctcaagtgct cctcactctc
      241 tgcaacaatg acgtcgccgg ttgatgggtc ccggaaggca aggaagagca gtgggtcgaa
      301 cggagtgtac accgaatagc gcttcccctt ttgttggtag gtaagtagta gtgatttcga
      361 cgccttccga cagattccca ccgaaaccga ggccaaactc tgcagtgacg ctggtgacgt
      421 catcctcact gaagcacaca gcgcctcgca ccgtcagaac gtacccagac atgatgaggt
      481 ggaagttctt cttcgctaga gcgtaagcga gcgtgccaca gatctccttc acctcctcgt
      541 cgtccacctc aatgagtccg cctgtctgct cgttgatgcg gaagacgagg atgggcacgt
      601 cgagcgggta gagaaggaag aactgaaggc cagactcagc gaagaaaggt gcggcggatt
      661 acacactcta gcggcctttg cagaactggg tctgtcagtg tgaggagccg ccgttctgca
      721 ggcgcaacca acaccacctc tccatcatcg tccacaat
//