LOCUS       JO217827                 632 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c13710_c mRNA sequence.
ACCESSION   JO217827
VERSION     JO217827.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          160 a          206 c          130 g          136 t
ORIGIN      
        1 tcaaccacac atccaaccaa gccgccacga cctcgcgcga agaattacaa caaaatggcc
       61 ctcaagagga tcaacaaaga gttgcaggat cttcaacgcg acccgcccac aaactgcagc
      121 gctggccctg tcggcgacga cctcttccac tggacggcta ccatcatggg accgcccgac
      181 agcccgtatc agggtggcgt cttcttcctt aacattcact tccccacaga ctaccccttc
      241 aagcctccca aagtaaactt cacaaccaag atctaccacc ccaacgttaa tggcaacggt
      301 agcatttgcc tcgacattct gaaggaccag tggagccctg ctcttactat ctcgaaagtg
      361 ctgctctcca tctgctctct gctcaccgac cccaacccag atgatcctct tgtgcccgag
      421 attgcccaca tctacaaaac cgataggtcg aggtatgaaa acacggctcg ggaatggacg
      481 cgcaagtacg ccatgtaagc tacgttcttt cggaagatgt agatcaagtg cggcgctacc
      541 tctctgttac cctacccagc tctatctgta gggacttccg gaatcatgat catgcgcctt
      601 gtccgcgtta atgatcgtgt tagaacacct tt
//