LOCUS       JO216588                 903 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c11788_c mRNA sequence.
ACCESSION   JO216588
VERSION     JO216588.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Zygnematophycidae; Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          194 a          313 c          206 g          190 t
ORIGIN      
        1 acgtcccaca gccctccgcc cgggagattt tcctctccct ctctctcctg acaccacccc
       61 gcgacgtttc ctcgcactcg ttaacgctag tctgccttga acgcgataac aggcgggtga
      121 ccttgaagcc tgctgagagc aagcaatcac aaaatgatgc gaccggcagg ctcgtcccag
      181 cactcgacgc aggggggcag ttaccaacag cagcatcagg agcagcagca gcagcagcag
      241 ccgcagcagc agctccccac cattggcatg ccagccgcgg gcgtgccagc cggtgttgct
      301 tatggctacc cggtccatcc tccggttcct tcccatcttc ccccttatgg ataccctgct
      361 ggcacaggag cggccatctg gccctgccag cagtgcagtg ccccgtaccc ccttccatcc
      421 ggctcaaaca gctggcggtg caaaaactgt gggaagttca acagcacccg ccgcgaccaa
      481 tgcgttatca gctgacatga caccgctggc tccagtttct cctacctcac ttgaaagttt
      541 ggcatataca tcgcacagca ccactctgta cctgacacga cgtattggac atgccgactt
      601 tccagtttca aagaggaatg tatccactgc cgcagcttct gtcaactgta cagcactgat
      661 gcctcccgca cgtcaggctt cccgcacgat caagggatgc actcccacac aacccagacc
      721 tcatcttttt cagttggact gagggcacat caccgcagga aaagctgcac tgtcctgcgc
      781 catctcaggc gatggcctat cgctcatcac caacgccatc atcatggctt acgcgtcctc
      841 tcatggctcc cacatgacaa atgttccctc taatggctat tttgctgtga atattgctac
      901 tgc
//