LOCUS       JO216431                 812 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Penium margaritaceum pmar_71836_c11555_c mRNA sequence.
ACCESSION   JO216431
VERSION     JO216431.1
DBLINK      BioProject: PRJNA68813
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Penium margaritaceum
  ORGANISM  Penium margaritaceum
            Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae;
            Desmidiales; Peniaceae; Penium.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Penium margaritaceum"
                     /mol_type="mRNA"
                     /strain="SKD2004_CL18"
                     /db_xref="taxon:102169"
BASE COUNT          203 a          208 c          260 g          134 t
ORIGIN      
        1 gggcagcaga gcagatcatg gtggcgagtg gacgacacgt catcagcagg agcagcagca
       61 ggtgcaggaa gacagcagca agctgcggca gcagcttcgg cggcgagcag cagcggcggt
      121 ggtggtcgta gggggtggtg agaggcagcg agcagccgaa cgcgtttgtg ccgatgaacg
      181 tggcggagca agggcagtgg ttctacttgg acgtgcctgc catggcacgc gcgtgcggac
      241 tcgcaccgtc ggccgacctg ccgccggtgc tgttggaggc cactgacaga ccaaggaagg
      301 ctcttgtggc tgaatgggac aatgaatcag agggagcaga ggacagaagc agcagcagca
      361 cgctagcgtt gacggcagca cctcaacgtg cgagcagccg atatccactt cccaaggacg
      421 tgaacgattt gctgcgacag cctgtcatgc cgcaggacca cctcaattac gcgcttacct
      481 ggtacacact gtttgcggcc acgtccatca tggcatacca ccgtctgaga gggaaaagga
      541 cgaaacgtcc gctggccctc tcacgccgac ggtgaggccg atgtggctga ccggagtgtg
      601 gaaaggacac cacaaggcag tggtgtcact atataaaggg atcacgacgt gaaaacatca
      661 cgggggaaag aatttgcaag ggaaacactt gcacctgtga gccacgtggc cagatagagt
      721 tagcytctat gccctcctac rtctctgaaw kcgatgtgst mtcwccttga agaccaaaaa
      781 ggtattgcta agagtatgaa tctcaaacaa aa
//