LOCUS JO202100 744 bp mRNA linear TSA 23-FEB-2012 DEFINITION TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c13050_c_s mRNA sequence. ACCESSION JO202100 VERSION JO202100.1 DBLINK BioProject: PRJNA51157 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chlorokybus atmophyticus ORGANISM Chlorokybus atmophyticus Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlorokybales; Chlorokybaceae; Chlorokybus. REFERENCE 1 (bases 1 to 744) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 744) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..744 /organism="Chlorokybus atmophyticus" /mol_type="mRNA" /strain="UTEX 2591" /culture_collection="UTEX:2591" /db_xref="taxon:3144" BASE COUNT 130 a 261 c 200 g 151 t ORIGIN 1 gtctgctggc gtcgcgccgg acgccagtat gggtctcagg accatccccg ggatcggcat 61 ggtcttattc ctgggatcgg acctatccca agtggcaatt tgggagggtt ctctggtcca 121 ggacccggct tcggtcctcc accaggtctt gggggtatgg cacctgggtt gggacccctg 181 ccccacgctg cttccgccgg aggccaagca ccaatgtcag gtcctggatc cggccagggt 241 cctggtcccg gccagggtcc ctggtccacc accatttggt gctccaggac ctccccccag 301 gccaatgtac cctccaccag gccccccggg tccacctggc aggccgcatg gaaggcctct 361 cccttcacca cctggccctc caccatacgg tgcaccgcag atgttcaacc ccgcaggccc 421 tcctccgccc atgcacgcac agcagccacc gccacagatg tttcgtccgc caggcggccc 481 gccgccttac gcccagcagg gcatgccagg tgctggtcat atgatgccac ctcgcccgcc 541 gccccctcca tcaatgagac cccccaaana tgccacccca gagaccctga tcttgcgtct 601 tgtgttgttg ccgcgaagtt actactgtat gttacaatag ttgttataca gcaggttgtg 661 cacattgcat gcacattgtg ctgttaaaga taaagcaaaa ggngtgtagc tgcttgcgtc 721 cgtcggtcag cagctgatgt gaca //