LOCUS       JO201631                 591 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c11991_c_s
            mRNA sequence.
ACCESSION   JO201631
VERSION     JO201631.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT          140 a          141 c          178 g          131 t
ORIGIN      
        1 ggatccacct caagcatggc gggcgcatgc agttgggact tttcctcaag ggcattggac
       61 tcagtctaga ggacgccatt tctttctggc gggaggagtt tacaaagaag gtaycgggat
      121 cgagaagttt cagaaggagt acatgtacgg catccggcat aattatggca aagagggcaa
      181 gcgcgcggac tatacaccct acacatgcat gaagatcatc aacgcagcgc ctgcggctgg
      241 cgatcaccat ggatgtccat atcgtcattt cagtgcggac aacctgcgag ctgcattgcg
      301 aagcatgcgg ctctctgctg gtgtcgttga tgatgtgatg gacaaggcca agaatcacca
      361 ctatcagttg gcttgcgcaa gcgcgtttga gggcatgcat aattgcgagt gcgaaacagg
      421 catcaaccat cccaatcagt attttgaaga aagccgaaaa ggttttggca ctggtggagg
      481 ctgctcaagc gttgccggaa gctcccgcgg ctgccgccct cacgggttct gctggtgctg
      541 agacgcaagc ggcctagtgc gtgtatgtgt acttgtagcg tgcaggttga a
//