LOCUS       JO201514                 796 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c11788_c_s
            mRNA sequence.
ACCESSION   JO201514
VERSION     JO201514.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT          191 a          210 c          214 g          181 t
ORIGIN      
        1 aattcccggg atgacaacca gatgctgcgt gcccggatgg agtctgcgac attgtcacca
       61 tacaaggtcc cgatgcccag tggggatggc accgatgtga tcaagattga cccttacctg
      121 gagccttaca agggtcactt gcaataccgt tacagcaagt ttaaggaacg gttcgctgaa
      181 attgataagt atgagggtgg tttggagaag ttctcaaggg gttatgagaa gttcggattc
      241 actttgtctc gtgatggcat cacataccga gagtgggccc ctgcagccca gaaggcttcc
      301 ctgattggcg acttcaataa ctgggaccag aatgctgacc ccatgaccaa gaatccctat
      361 ggcgtgtttg agctcaacct gcccaacaat gcagacggca ctcctgccat ccctcacggg
      421 tcgaaggtca agattcgcat gctatccgag tccggagagt ggattgaccg cattcccgcg
      481 tggatcaagt atgccgttca gcctgaaggt caagttctgt atgatggtgt gtactgggat
      541 gcacctgaga agtacgagtt caagcacccc aggccaccga agcctcgcac tctgcgcatc
      601 tatgaggcac atgttggcat gtcgtctgtg gagcccaaga tcagcacata cgccgagttc
      661 cgagacaccg tgctgccgcg catcaaggac ctgggctaca acgctgtgca actcatggcc
      721 gtcatggaac acgcgtacta tggctcattc ggttaccaca tcacaaactt tttcgctgta
      781 tcttcaaggt gtggaa
//