LOCUS       JO201467                 490 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c11686_c_s
            mRNA sequence.
ACCESSION   JO201467
VERSION     JO201467.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT          104 a          115 c          137 g          134 t
ORIGIN      
        1 ccagcaatgg ttgtgtggta acgtaagtag ctttacttct ctaatctcca ccccccgcca
       61 gtctctgctg ctattggttg catgtgggta gcgagttgaa atgtatatgg cagtgtaagt
      121 ggctttactg ccctggtcat actcctcgcc ggtctgtgct gacctgctgt ataacaagtg
      181 gcagtgctaa cggtcatcag gtgcttgcaa caagctgttg agggcacttg atgaaggttg
      241 aagcgcgcaa aagcatgtct tttggacagc atgagctgta cgccaatgcg ttgcggactt
      301 taccggtaac agtggcaagt ggttttgcgc agcagcccaa tgcgcgatgt aaattcagcc
      361 ctcacgccat ctgtagccgc aatgtatgct gcagcatttg taaaaggtcg acatgggctc
      421 gtccgcggat ctgatctgga tttgcatgaa gaacgcctga ttgtggttgc atttggggca
      481 ggtcacttcc
//