LOCUS JO201467 490 bp mRNA linear TSA 23-FEB-2012 DEFINITION TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c11686_c_s mRNA sequence. ACCESSION JO201467 VERSION JO201467.1 DBLINK BioProject: PRJNA51157 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chlorokybus atmophyticus ORGANISM Chlorokybus atmophyticus Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlorokybales; Chlorokybaceae; Chlorokybus. REFERENCE 1 (bases 1 to 490) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 490) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..490 /organism="Chlorokybus atmophyticus" /mol_type="mRNA" /strain="UTEX 2591" /culture_collection="UTEX:2591" /db_xref="taxon:3144" BASE COUNT 104 a 115 c 137 g 134 t ORIGIN 1 ccagcaatgg ttgtgtggta acgtaagtag ctttacttct ctaatctcca ccccccgcca 61 gtctctgctg ctattggttg catgtgggta gcgagttgaa atgtatatgg cagtgtaagt 121 ggctttactg ccctggtcat actcctcgcc ggtctgtgct gacctgctgt ataacaagtg 181 gcagtgctaa cggtcatcag gtgcttgcaa caagctgttg agggcacttg atgaaggttg 241 aagcgcgcaa aagcatgtct tttggacagc atgagctgta cgccaatgcg ttgcggactt 301 taccggtaac agtggcaagt ggttttgcgc agcagcccaa tgcgcgatgt aaattcagcc 361 ctcacgccat ctgtagccgc aatgtatgct gcagcatttg taaaaggtcg acatgggctc 421 gtccgcggat ctgatctgga tttgcatgaa gaacgcctga ttgtggttgc atttggggca 481 ggtcacttcc //