LOCUS       JO201110                 536 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c11068_c_s
            mRNA sequence.
ACCESSION   JO201110
VERSION     JO201110.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT          118 a          143 c          163 g          112 t
ORIGIN      
        1 gggcaaggtc caactgttgc cagatgcggc catgccagag cgcttctact gcaggcaacc
       61 acaaatagtg cactcggtgg tgctgccatg gctggtcgat gttgctggag acaacgtgga
      121 gtctgatgat gatgatgatg aagcacccga cttgtcgccg cccagcgtgg agtgtctgtt
      181 ctcttctcaa agcagtgaga ggttactgac gggtgcggcg gtcgttccaa gcccccttgc
      241 agacgagcgc ttggtgtgcc tcacagccag ctctgagcta gtcgccttgg agccgagtgt
      301 tgtcgagagc agtgacttgt tgcatgccga tcagaacacg agcgatgctg aacagatggc
      361 tgctgcacac caagaggcac tccgcagaga gctgttgaga ggccctcctt ctatgaaact
      421 gccacctatg cctccaggga acgaggtgca ggatatgcgc acgcttgagg gtcgcaagca
      481 cctgcacgag tgttcaaagc tcctaaggga gaagtacgtc cagcatctgt atcaca
//