LOCUS       JO200933                 476 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c10735_c_s
            mRNA sequence.
ACCESSION   JO200933
VERSION     JO200933.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT          102 a          154 c          127 g           93 t
ORIGIN      
        1 tggaactgcg ccgacatctc catcgggttc cccaccaagt ccccgacgcc cgcacccggc
       61 cacggctgct tctatcataa cagcaattcc aaagtctgcg agcgcaactc caaagcctgc
      121 ggctggacgc ctatttacaa caccaggagg tcttgctgca agtctgtcgg cgggtgcagc
      181 ccgacgccct caccctctcc tcccgccagc aagggctgct accgcgccac ggcgtggtac
      241 cccgtgcgcg agtgcggcta cgacgccaag gcctgtaact ggttcaacaa cgtgtgggcc
      301 accaaggcag agtgctgcaa gcctggcaat ggacatcctc agggctgcgg tcgcgccgac
      361 taaggagcaa catggtatga agcgagagtt cagtttccgc ctatttttgt tttcaaggca
      421 atcaggcaac tacctttcac ttgaaaggtg ctatacatag ttgtgtgcag cgcaac
//