LOCUS       JO200769                 444 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Chlorokybus atmophyticus strain UTEX 2591 chatm_c10416_c_s
            mRNA sequence.
ACCESSION   JO200769
VERSION     JO200769.1
DBLINK      BioProject: PRJNA51157
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chlorokybus atmophyticus
  ORGANISM  Chlorokybus atmophyticus
            Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
            Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Chlorokybus atmophyticus"
                     /mol_type="mRNA"
                     /strain="UTEX 2591"
                     /culture_collection="UTEX:2591"
                     /db_xref="taxon:3144"
BASE COUNT           76 a          147 c          117 g          104 t
ORIGIN      
        1 cagccttggc tgctcgcttg gggtttaggc tgcaattgaa tcatggcatt gtcgactgac
       61 agccctcgta ttaactttgc aaccgtgttc atcttgatcg gactcatcgg catgctccgc
      121 ttcgtcaacg tctcaatctt ctcaacctct tcggtgggtt tttcgggggt ctaggaggcg
      181 gcggtgtctg cagcaaaggt gaccgcacgg gccggaagcg gcattttgcg gtgctaacaa
      241 cactcgcgtg aacagcgttc tgtgcacaag ctcctgtgta ggcctccaat gttggcagga
      301 gccaaaccct agccctactc tataaatccc tcttgtagcc tcccaagacg atgccgccgc
      361 agacgtgctc accgctctgc tgctgaccag caccgccctg gtcgctcccg ccgccgccgc
      421 cgccgccgcc ttgcgcagca tccc
//