LOCUS       JO181346                1092 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c42617_c_s
            mRNA sequence.
ACCESSION   JO181346
VERSION     JO181346.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          207 a          275 c          367 g          236 t
ORIGIN      
        1 ggacgtgtac aagattcggc ggtattggca cagtgcctgt gggacgtgtg gagactggcg
       61 tccttaagcc cggcatggtc gtggtgttcg ccccctctgg cctgaccact gaggtcaagt
      121 ccgtggagat gcaccacgag tccctgcccg aggctgcccc cggtgacaac gtgggcttca
      181 acgtgaagaa cgtgtctgtg aaggagctga agcgtgggtt tgtcgcctct gactccaaga
      241 acgaccccgc aaaggaggct gccagcttca ccagccaggt catcatcatg aaccaccctg
      301 gccagattgg caacggctac gccccggtgc tggattgcca cacttcccac atagctgtga
      361 agttcgccga gctggtcacc aaggtggaca ggcgttcggg caaggagctc gagaaggagc
      421 ccaagttcct gaagaacggt gacgctggtt tcgtcaagat gattcccacc aagcccatgt
      481 gcgtggagac tttctctgag tancctccnc tgggccgntt tgccgtgcgt ganatgcgtc
      541 agacggtggc cgtcggtgtc atcaaggctg ttgagaagaa ggatgcttct ggcaaggtca
      601 cnaaggcngc tgccaaggcc agcaagaagt gaangcaaac gctgctgctg ctgcatgggg
      661 gaagtggcct gcggtcactg cattgcagcc ggcgctgtat tgggcaggtg agaggtggcc
      721 atatggtggc ggtcagccag tgcagcagct gttggtctgt catactggga gagggctgtt
      781 gcagtagctg cagcatgtgg cctggcagtg gcactggggt tgaggggctc cagtgtgcat
      841 cagggttggt ggtgacggac ggtagcaacc tgggtcctcc ccggggcgtt gtccgtctga
      901 ttgaggggcg caagcgccag acgtgggtgt tggatcggcg gtggcgggcc taatctggaa
      961 tgcaggccag ggctttccct tgcatgtggt ggtggatcgg tcttgttgaa gaaacatctc
     1021 gtatgtctcc taggaaattt tggtctgtac ttcagtaatg gcagagcatg gcaattcact
     1081 ccattcacgt tg
//