LOCUS JO181346 1092 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c42617_c_s mRNA sequence. ACCESSION JO181346 VERSION JO181346.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 1092) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 1092) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1092 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 207 a 275 c 367 g 236 t ORIGIN 1 ggacgtgtac aagattcggc ggtattggca cagtgcctgt gggacgtgtg gagactggcg 61 tccttaagcc cggcatggtc gtggtgttcg ccccctctgg cctgaccact gaggtcaagt 121 ccgtggagat gcaccacgag tccctgcccg aggctgcccc cggtgacaac gtgggcttca 181 acgtgaagaa cgtgtctgtg aaggagctga agcgtgggtt tgtcgcctct gactccaaga 241 acgaccccgc aaaggaggct gccagcttca ccagccaggt catcatcatg aaccaccctg 301 gccagattgg caacggctac gccccggtgc tggattgcca cacttcccac atagctgtga 361 agttcgccga gctggtcacc aaggtggaca ggcgttcggg caaggagctc gagaaggagc 421 ccaagttcct gaagaacggt gacgctggtt tcgtcaagat gattcccacc aagcccatgt 481 gcgtggagac tttctctgag tancctccnc tgggccgntt tgccgtgcgt ganatgcgtc 541 agacggtggc cgtcggtgtc atcaaggctg ttgagaagaa ggatgcttct ggcaaggtca 601 cnaaggcngc tgccaaggcc agcaagaagt gaangcaaac gctgctgctg ctgcatgggg 661 gaagtggcct gcggtcactg cattgcagcc ggcgctgtat tgggcaggtg agaggtggcc 721 atatggtggc ggtcagccag tgcagcagct gttggtctgt catactggga gagggctgtt 781 gcagtagctg cagcatgtgg cctggcagtg gcactggggt tgaggggctc cagtgtgcat 841 cagggttggt ggtgacggac ggtagcaacc tgggtcctcc ccggggcgtt gtccgtctga 901 ttgaggggcg caagcgccag acgtgggtgt tggatcggcg gtggcgggcc taatctggaa 961 tgcaggccag ggctttccct tgcatgtggt ggtggatcgg tcttgttgaa gaaacatctc 1021 gtatgtctcc taggaaattt tggtctgtac ttcagtaatg gcagagcatg gcaattcact 1081 ccattcacgt tg //