LOCUS JO181121 417 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c41032_c_s mRNA sequence. ACCESSION JO181121 VERSION JO181121.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 417) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 417) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..417 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 157 a 75 c 80 g 101 t ORIGIN 1 acaagcacag catcaatagg aactctcaga gtttaacata ttatatacga tggagaatat 61 caaagaacaa ttaagaactg argagacaat ggaatttctc ccaagaactt gccatygcag 121 aagagatttt ayagaaagga aacaccaacg atcgaaagta cttttgtcct actkcaatct 181 gtttgattcg cagcaagaag agaagtgaca aaaacaaagg aattaagcta ttacaaggaa 241 ttattatcga tcccaaactc gataaagaac tgcgacgcag ttgcttttta ttatatggca 301 tttgggactc tatagagttg aagaatatac ggaatctcgc aagtttttga cgatcttgct 361 caaccgaaga gccaaacaac atgcaagccc aagcattgaa cagtttgata gaggtac //