LOCUS       JO181121                 417 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c41032_c_s
            mRNA sequence.
ACCESSION   JO181121
VERSION     JO181121.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          157 a           75 c           80 g          101 t
ORIGIN      
        1 acaagcacag catcaatagg aactctcaga gtttaacata ttatatacga tggagaatat
       61 caaagaacaa ttaagaactg argagacaat ggaatttctc ccaagaactt gccatygcag
      121 aagagatttt ayagaaagga aacaccaacg atcgaaagta cttttgtcct actkcaatct
      181 gtttgattcg cagcaagaag agaagtgaca aaaacaaagg aattaagcta ttacaaggaa
      241 ttattatcga tcccaaactc gataaagaac tgcgacgcag ttgcttttta ttatatggca
      301 tttgggactc tatagagttg aagaatatac ggaatctcgc aagtttttga cgatcttgct
      361 caaccgaaga gccaaacaac atgcaagccc aagcattgaa cagtttgata gaggtac
//