LOCUS JO179032 506 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c34297_c_s mRNA sequence. ACCESSION JO179032 VERSION JO179032.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 506) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 506) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..506 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 91 a 162 c 158 g 88 t ORIGIN 1 gcgcgggagg agggcgtggg gacggctgtg gaagggcgac catgcccaac ctccagcgcg 61 ccatgctcat gaacgccggw ymsmkggmca cttacgacac ggtgaaggca cagcggtcaa 121 gtcggcaccg gcattggcat cctctctgat aaccccttca cgcacactgt tgcgagcacg 181 atagcggcgt tcgtggcgac cgtgctgacg aatccgctgg acgtggtcaa gacgcgcatc 241 atgaacatga agcccggcga gtaccgcaac tcactcgact gcttcgccaa gacgctggcg 301 gcggagggtc cgctggcgtt ctacaagggc ttcgtgccgt tcttcctccg cctcggcccg 361 cacaccgtca tcaccatgct cgccttcgag cagctcgaga aggtcctcaa ccgcctcacc 421 ggacgcgacg tctgagagcg gcccgagcac gtgtgtggat gcgtgccact gtgtgctgtg 481 ctgtgaatgg agttgttgcc ccacac //