LOCUS       JO179032                 506 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c34297_c_s
            mRNA sequence.
ACCESSION   JO179032
VERSION     JO179032.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT           91 a          162 c          158 g           88 t
ORIGIN      
        1 gcgcgggagg agggcgtggg gacggctgtg gaagggcgac catgcccaac ctccagcgcg
       61 ccatgctcat gaacgccggw ymsmkggmca cttacgacac ggtgaaggca cagcggtcaa
      121 gtcggcaccg gcattggcat cctctctgat aaccccttca cgcacactgt tgcgagcacg
      181 atagcggcgt tcgtggcgac cgtgctgacg aatccgctgg acgtggtcaa gacgcgcatc
      241 atgaacatga agcccggcga gtaccgcaac tcactcgact gcttcgccaa gacgctggcg
      301 gcggagggtc cgctggcgtt ctacaagggc ttcgtgccgt tcttcctccg cctcggcccg
      361 cacaccgtca tcaccatgct cgccttcgag cagctcgaga aggtcctcaa ccgcctcacc
      421 ggacgcgacg tctgagagcg gcccgagcac gtgtgtggat gcgtgccact gtgtgctgtg
      481 ctgtgaatgg agttgttgcc ccacac
//