LOCUS       JO178731                 466 bp    mRNA    linear   TSA 11-JAN-2012
DEFINITION  TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c33660_c_s
            mRNA sequence.
ACCESSION   JO178731
VERSION     JO178731.1
DBLINK      BioProject: PRJNA51161
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Chaetosphaeridium globosum
  ORGANISM  Chaetosphaeridium globosum
            Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
            Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Chaetosphaeridium globosum"
                     /mol_type="mRNA"
                     /strain="SAG 26.98"
                     /culture_collection="SAG:26.98"
                     /db_xref="taxon:96477"
BASE COUNT          132 a           99 c          101 g          134 t
ORIGIN      
        1 aatcgcacga tggacccgct atatggattt atcaattgta tatgcacaaa acctgcatgt
       61 caagggacgg accacaaaca tccatcaatt tggtattggc cattgcgctt ttggccaaca
      121 agtaacatca aattcgtatc cgaattatgt ctcatgctac ttgatacggg tagatgcagt
      181 cttcatcacg ttatctggaa ggagcacaaa agaaaagcat tgaatgcctc atgcaatgaa
      241 gttgttgtgt atgaaagaag agagcataag gaaacgatta ggctatcaga catactccga
      301 acggtgggtc gaaggacaac aaccctctac cttgacttat ctcacccatg cattgccagt
      361 ttaattgcga ggtggtttac tttgggcttt gtcagacttt atgcagatgt catgcttcca
      421 ccacatgcat ctagttgtgc ctatatgctt acgtgtgttt tcttgg
//