LOCUS JO178731 466 bp mRNA linear TSA 11-JAN-2012 DEFINITION TSA: Chaetosphaeridium globosum strain SAG 26.98 chglo_c33660_c_s mRNA sequence. ACCESSION JO178731 VERSION JO178731.1 DBLINK BioProject: PRJNA51161 KEYWORDS TSA; Transcriptome Shotgun Assembly. SOURCE Chaetosphaeridium globosum ORGANISM Chaetosphaeridium globosum Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium. REFERENCE 1 (bases 1 to 466) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Broad phylogenomic sampling and the sister lineage of land plants JOURNAL PLoS ONE 7 (1), E29696 (2012) PUBMED 22253761 REFERENCE 2 (bases 1 to 466) AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. TITLE Direct Submission JOURNAL Submitted (12-JUL-2011) Cell Biology and Molecular Genetics, University of Maryland, Bioscience Research Building, College Park, MD 20947, USA COMMENT Two-step clustering process: First, trimmed 454 reads were clustered with MIRA v.2.9.43 using 454 EST assembly specific parameters. Second, the raw Sanger reads were combined with the 454 contigs + singleons (with quality scores) and were cleaned then clustered with CAP3 (100 bp plus 95 percent identity overlap). ##Assembly-Data-START## Assembly Method :: MIRA v. 2.9.43; CAP3 Sequencing Technology :: 454 GS FLX Titanium; Sanger ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..466 /organism="Chaetosphaeridium globosum" /mol_type="mRNA" /strain="SAG 26.98" /culture_collection="SAG:26.98" /db_xref="taxon:96477" BASE COUNT 132 a 99 c 101 g 134 t ORIGIN 1 aatcgcacga tggacccgct atatggattt atcaattgta tatgcacaaa acctgcatgt 61 caagggacgg accacaaaca tccatcaatt tggtattggc cattgcgctt ttggccaaca 121 agtaacatca aattcgtatc cgaattatgt ctcatgctac ttgatacggg tagatgcagt 181 cttcatcacg ttatctggaa ggagcacaaa agaaaagcat tgaatgcctc atgcaatgaa 241 gttgttgtgt atgaaagaag agagcataag gaaacgatta ggctatcaga catactccga 301 acggtgggtc gaaggacaac aaccctctac cttgacttat ctcacccatg cattgccagt 361 ttaattgcga ggtggtttac tttgggcttt gtcagacttt atgcagatgt catgcttcca 421 ccacatgcat ctagttgtgc ctatatgctt acgtgtgttt tcttgg //